Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP4B1Q9Y6B7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CD99P1-205ENST00000527459 561 ntBASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 AC067852.2-201ENST00000590513 2313 ntBASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 AC012313.1-201ENST00000593393 3059 ntBASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP4B1Q9Y6B7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4B1Q9Y6B7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4B1Q9Y6B7 AC139713.2-201ENST00000641328 2723 ntBASIC18.27■□□□□ 0.51
AP4B1Q9Y6B7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
AP4B1Q9Y6B7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.27■□□□□ 0.51
AP4B1Q9Y6B7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4B1Q9Y6B7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 HLA-B-256ENST00000639848 1089 ntBASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4B1Q9Y6B7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms