Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 TOB2P1-201ENST00000469761 992 ntBASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC28.84■■■□□ 2.21
CDC42BPBQ9Y5S2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPBQ9Y5S2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
CDC42BPBQ9Y5S2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC28.81■■■□□ 2.2
CDC42BPBQ9Y5S2 NUS1P1-201ENST00000446295 882 ntBASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 PNN-202ENST00000553331 656 ntTSL 3 BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 HOXB1-202ENST00000577092 1414 ntBASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms