Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 AL160286.2-201ENST00000567150 934 ntBASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB11Q9Y5F2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB11Q9Y5F2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AC104417.2-201ENST00000562989 1793 ntBASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AC128688.1-201ENST00000487626 519 ntBASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 DUX4L26-201ENST00000489078 1255 ntBASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 Z82202.1-201ENST00000623446 1880 ntBASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 AP000974.1-201ENST00000623909 2387 ntBASIC18.66■□□□□ 0.58
PCDHB11Q9Y5F2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 NTF6B-201ENST00000591913 560 ntBASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB11Q9Y5F2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB11Q9Y5F2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB11Q9Y5F2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHB11Q9Y5F2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PCDHB11Q9Y5F2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB11Q9Y5F2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms