Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA1Q9UND3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 KRT8P8-201ENST00000434750 1448 ntBASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 FAM207BP-201ENST00000447172 505 ntBASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 AC008040.2-201ENST00000461049 708 ntBASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPA1Q9UND3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPA1Q9UND3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 AC104076.2-201ENST00000448912 469 ntBASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 DUX4L26-201ENST00000489078 1255 ntBASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPA1Q9UND3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AC120498.9-201ENST00000339021 3867 ntBASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 INGX-201ENST00000359239 846 ntBASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPIPA1Q9UND3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms