Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RABGEF1Q9UJ41 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 AC110285.5-201ENST00000611501 352 ntBASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 AC007613.1-201ENST00000572811 2597 ntBASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RABGEF1Q9UJ41 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 AL031598.1-201ENST00000561511 1773 ntBASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 AC073912.3-201ENST00000624414 853 ntBASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
RABGEF1Q9UJ41 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 FP475955.4-201ENST00000623131 1990 ntBASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 ECEL1P3-201ENST00000427961 737 ntBASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RABGEF1Q9UJ41 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms