Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AL391422.3-201ENST00000603791 2761 ntBASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 PCED1CP-201ENST00000419887 785 ntBASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 AL671277.2-201ENST00000458060 996 ntBASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 FAM86EP-206ENST00000510506 987 ntBASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NLGN3Q9NZ94 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 AC009947.2-201ENST00000444014 672 ntBASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NLGN3Q9NZ94 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 NEK4P2-201ENST00000580004 1012 ntBASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 IER3-202ENST00000376377 1350 ntBASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 PCDHAC2-203ENST00000615316 3011 ntBASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.65■□□□□ 0.58
NLGN3Q9NZ94 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NLGN3Q9NZ94 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NLGN3Q9NZ94 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms