Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 Z98044.1-201ENST00000632503 1764 ntBASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 AC110285.7-201ENST00000624417 1536 ntBASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
CDC42SE1Q9NRR8 AL031598.1-201ENST00000561511 1773 ntBASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 CA15P2-201ENST00000611168 834 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms