Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 BCL2-203ENST00000589955 5011 ntBASIC17.94■□□□□ 0.46
KLHL1Q9NR64 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 KRT18P16-201ENST00000510337 1294 ntBASIC17.94■□□□□ 0.46
KLHL1Q9NR64 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 AC097493.4-201ENST00000641197 219 ntBASIC17.94■□□□□ 0.46
KLHL1Q9NR64 AL031985.4-201ENST00000642138 673 ntBASIC17.94■□□□□ 0.46
KLHL1Q9NR64 KRT8P9-201ENST00000558927 1449 ntBASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KLHL1Q9NR64 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 MIR6786-201ENST00000616843 113 ntBASIC17.93■□□□□ 0.46
KLHL1Q9NR64 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KLHL1Q9NR64 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 AC098818.2-201ENST00000564925 2320 ntBASIC17.92■□□□□ 0.46
KLHL1Q9NR64 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 AC012306.2-201ENST00000609350 630 ntBASIC17.92■□□□□ 0.46
KLHL1Q9NR64 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KLHL1Q9NR64 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms