Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKKSQ9NPJ1 AL158211.5-201ENST00000623583 2518 ntBASIC18.07■□□□□ 0.48
MKKSQ9NPJ1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKKSQ9NPJ1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MKKSQ9NPJ1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 AC007952.6-201ENST00000573168 2673 ntBASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 AC003957.1-201ENST00000625108 2673 ntBASIC18.06■□□□□ 0.48
MKKSQ9NPJ1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 TSPY21P-201ENST00000433481 731 ntBASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 CCR12P-201ENST00000446203 998 ntBASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 KRT8P11-201ENST00000409686 1436 ntBASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MKKSQ9NPJ1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 CA15P1-201ENST00000481698 905 ntBASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 AC005363.2-201ENST00000618631 242 ntBASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 AC116562.4-202ENST00000641738 218 ntBASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 HCG11-201ENST00000411553 5696 ntBASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MKKSQ9NPJ1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SDHAP1-207ENST00000440850 2000 ntBASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 FAM210CP-201ENST00000445714 574 ntBASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms