Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM2Q9C040 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM2Q9C040 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 IRX1P1-201ENST00000438849 1838 ntBASIC17.54■□□□□ 0.4
TRIM2Q9C040 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 AL049812.1-201ENST00000432563 2267 ntBASIC17.54■□□□□ 0.4
TRIM2Q9C040 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 AL160286.2-201ENST00000567150 934 ntBASIC17.54■□□□□ 0.4
TRIM2Q9C040 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
TRIM2Q9C040 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM2Q9C040 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM2Q9C040 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 HLA-A-209ENST00000638375 975 ntBASIC17.53■□□□□ 0.4
TRIM2Q9C040 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM2Q9C040 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.53■□□□□ 0.4
TRIM2Q9C040 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM2Q9C040 FEM1AP3-201ENST00000403722 1741 ntBASIC17.52■□□□□ 0.4
TRIM2Q9C040 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM2Q9C040 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM2Q9C040 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 AC239809.2-201ENST00000415381 517 ntBASIC17.52■□□□□ 0.4
TRIM2Q9C040 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM2Q9C040 TSPY21P-201ENST00000433481 731 ntBASIC17.52■□□□□ 0.4
TRIM2Q9C040 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRIM2Q9C040 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM2Q9C040 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM2Q9C040 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.39
TRIM2Q9C040 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM2Q9C040 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM2Q9C040 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms