Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AC112907.3-201ENST00000577781 2400 ntBASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 TSPY19P-201ENST00000418461 509 ntBASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 TSPY18P-201ENST00000441642 509 ntBASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 KRT8P26-201ENST00000534154 1276 ntBASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 AL391807.1-203ENST00000604392 2365 ntBASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP4-1Q9BYQ7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-1Q9BYQ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 AC093525.10-201ENST00000625130 1569 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 MIR662-201ENST00000384847 95 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 TSPY22P-201ENST00000427496 604 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 CHCHD2P8-201ENST00000429873 447 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 NUS1P1-201ENST00000446295 882 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 AC034232.1-201ENST00000506026 1064 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 PNN-202ENST00000553331 656 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 GAS2L1P1-201ENST00000420145 1480 ntBASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-1Q9BYQ7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 KRT18P1-202ENST00000452408 1331 ntBASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 TCF3P1-201ENST00000423021 1937 ntBASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
KRTAP4-1Q9BYQ7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms