Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.46□□□□□ -0.09
VGLL1Q99990 MIR663A-201ENST00000385250 93 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 DUSP5P2-201ENST00000426873 1033 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 CDCA4P2-201ENST00000441182 718 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.46□□□□□ -0.09
VGLL1Q99990 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.46□□□□□ -0.09
VGLL1Q99990 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.46□□□□□ -0.09
VGLL1Q99990 AL137784.2-201ENST00000607332 1000 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.46□□□□□ -0.09
VGLL1Q99990 AC092437.1-201ENST00000624794 1048 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 WIZP1-201ENST00000531444 2299 ntBASIC14.46□□□□□ -0.09
VGLL1Q99990 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VGLL1Q99990 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VGLL1Q99990 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VGLL1Q99990 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.46□□□□□ -0.09
VGLL1Q99990 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VGLL1Q99990 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VGLL1Q99990 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.46□□□□□ -0.1
VGLL1Q99990 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VGLL1Q99990 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.46□□□□□ -0.1
VGLL1Q99990 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VGLL1Q99990 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.46□□□□□ -0.1
VGLL1Q99990 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VGLL1Q99990 IRX1P1-201ENST00000438849 1838 ntBASIC14.45□□□□□ -0.1
VGLL1Q99990 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VGLL1Q99990 MIPEPP3-201ENST00000412105 444 ntBASIC14.45□□□□□ -0.1
VGLL1Q99990 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.45□□□□□ -0.1
VGLL1Q99990 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.45□□□□□ -0.1
VGLL1Q99990 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.45□□□□□ -0.1
VGLL1Q99990 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
VGLL1Q99990 IKBKGP1-201ENST00000612193 1073 ntBASIC14.45□□□□□ -0.1
VGLL1Q99990 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VGLL1Q99990 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 AP006587.1-201ENST00000534129 1502 ntBASIC14.45□□□□□ -0.1
VGLL1Q99990 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VGLL1Q99990 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.45□□□□□ -0.1
VGLL1Q99990 AL031598.1-201ENST00000561511 1773 ntBASIC14.45□□□□□ -0.1
VGLL1Q99990 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
VGLL1Q99990 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VGLL1Q99990 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 KRT8P8-201ENST00000434750 1448 ntBASIC14.44□□□□□ -0.1
VGLL1Q99990 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.44□□□□□ -0.1
VGLL1Q99990 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.44□□□□□ -0.1
VGLL1Q99990 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VGLL1Q99990 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VGLL1Q99990 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VGLL1Q99990 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms