Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDCA3Q99618 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA3Q99618 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDCA3Q99618 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.86■□□□□ 0.77
CDCA3Q99618 KRT8P7-201ENST00000533003 1432 ntBASIC19.86■□□□□ 0.77
CDCA3Q99618 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.86■□□□□ 0.77
CDCA3Q99618 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.86■□□□□ 0.77
CDCA3Q99618 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.86■□□□□ 0.77
CDCA3Q99618 KRT18P31-201ENST00000506277 1292 ntBASIC19.86■□□□□ 0.77
CDCA3Q99618 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.86■□□□□ 0.77
CDCA3Q99618 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.86■□□□□ 0.77
CDCA3Q99618 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDCA3Q99618 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.86■□□□□ 0.77
CDCA3Q99618 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.86■□□□□ 0.77
CDCA3Q99618 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA3Q99618 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 TOB2P1-201ENST00000469761 992 ntBASIC19.85■□□□□ 0.77
CDCA3Q99618 AC106795.1-205ENST00000512851 1056 ntBASIC19.85■□□□□ 0.77
CDCA3Q99618 AL662844.1-201ENST00000546340 181 ntBASIC19.85■□□□□ 0.77
CDCA3Q99618 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 AC090616.6-201ENST00000582640 721 ntBASIC19.85■□□□□ 0.77
CDCA3Q99618 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.85■□□□□ 0.77
CDCA3Q99618 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 AC133561.1-201ENST00000568600 2415 ntBASIC19.85■□□□□ 0.77
CDCA3Q99618 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA3Q99618 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.85■□□□□ 0.77
CDCA3Q99618 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.85■□□□□ 0.77
CDCA3Q99618 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
CDCA3Q99618 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA3Q99618 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA3Q99618 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA3Q99618 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 FOSL1P1-201ENST00000511041 816 ntBASIC19.84■□□□□ 0.77
CDCA3Q99618 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CDCA3Q99618 AC006538.3-201ENST00000612495 578 ntBASIC19.84■□□□□ 0.77
CDCA3Q99618 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDCA3Q99618 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.84■□□□□ 0.77
CDCA3Q99618 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CDCA3Q99618 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA3Q99618 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDCA3Q99618 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CDCA3Q99618 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.83■□□□□ 0.77
CDCA3Q99618 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.83■□□□□ 0.77
CDCA3Q99618 AC104819.1-201ENST00000504587 486 ntBASIC19.83■□□□□ 0.77
CDCA3Q99618 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms