Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXRED1Q96CU9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 AL390961.4-201ENST00000623958 2535 ntBASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXRED1Q96CU9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 AC069152.1-201ENST00000438030 544 ntBASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXRED1Q96CU9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 SDHAP1-207ENST00000440850 2000 ntBASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 AL512353.2-201ENST00000448759 1962 ntBASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 FEM1AP3-201ENST00000403722 1741 ntBASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 YBX1P10-201ENST00000444752 975 ntBASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXRED1Q96CU9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 AC104581.1-202ENST00000635932 2618 ntBASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FOXRED1Q96CU9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms