Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF34Q969K3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF34Q969K3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF34Q969K3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF34Q969K3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF34Q969K3 KRT8P41-201ENST00000533985 1514 ntBASIC19.96■□□□□ 0.79
RNF34Q969K3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF34Q969K3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF34Q969K3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RNF34Q969K3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.95■□□□□ 0.79
RNF34Q969K3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF34Q969K3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF34Q969K3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF34Q969K3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF34Q969K3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF34Q969K3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF34Q969K3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RNF34Q969K3 AL355075.4-201ENST00000554988 638 ntBASIC19.95■□□□□ 0.78
RNF34Q969K3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF34Q969K3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.95■□□□□ 0.78
RNF34Q969K3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF34Q969K3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF34Q969K3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF34Q969K3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF34Q969K3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF34Q969K3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 MESTP1-201ENST00000404287 994 ntBASIC19.94■□□□□ 0.78
RNF34Q969K3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF34Q969K3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF34Q969K3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RNF34Q969K3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF34Q969K3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.94■□□□□ 0.78
RNF34Q969K3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF34Q969K3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF34Q969K3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF34Q969K3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF34Q969K3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF34Q969K3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF34Q969K3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF34Q969K3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF34Q969K3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF34Q969K3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RNF34Q969K3 RBM17P1-201ENST00000453646 1190 ntBASIC19.93■□□□□ 0.78
RNF34Q969K3 AC008040.2-201ENST00000461049 708 ntBASIC19.93■□□□□ 0.78
RNF34Q969K3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF34Q969K3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.93■□□□□ 0.78
RNF34Q969K3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF34Q969K3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF34Q969K3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF34Q969K3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF34Q969K3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF34Q969K3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms