Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 YBX1P10-201ENST00000444752 975 ntBASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 KRT18P29-201ENST00000397031 1267 ntBASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 HCG11-201ENST00000411553 5696 ntBASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 AP006587.1-201ENST00000534129 1502 ntBASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 AC005332.8-201ENST00000622750 2735 ntBASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 Z98044.1-201ENST00000632503 1764 ntBASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCHCR1Q8TD31 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AC124283.5-201ENST00000624661 1809 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AC007613.1-201ENST00000572811 2597 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 PRKY-204ENST00000533551 1019 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AC069544.1-201ENST00000609399 999 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 AL121829.2-201ENST00000620908 328 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 ITM2C-210ENST00000620962 501 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 FP475955.4-201ENST00000623131 1990 ntBASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCHCR1Q8TD31 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 IRX1P1-201ENST00000438849 1838 ntBASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 AC128676.1-201ENST00000454392 318 ntBASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.83■□□□□ 0.77
CCHCR1Q8TD31 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms