Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 AL138781.2-201ENST00000617896 1843 ntBASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMARCC2Q8TAQ2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 FEM1AP3-201ENST00000403722 1741 ntBASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 KRT16P1-201ENST00000399124 1418 ntBASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMARCC2Q8TAQ2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 AP003071.4-201ENST00000562276 1284 ntBASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SMARCC2Q8TAQ2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 AL160286.2-201ENST00000567150 934 ntBASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SMARCC2Q8TAQ2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SMARCC2Q8TAQ2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
SMARCC2Q8TAQ2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.33■■□□□ 1.16
SMARCC2Q8TAQ2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.33■■□□□ 1.16
SMARCC2Q8TAQ2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 AL445675.2-201ENST00000620291 557 ntBASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.32■■□□□ 1.16
SMARCC2Q8TAQ2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms