Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LMO3Q8TAP4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 CKBP1-201ENST00000565489 1086 ntBASIC20.46■□□□□ 0.87
LMO3Q8TAP4 AP000692.2-201ENST00000608391 879 ntBASIC20.46■□□□□ 0.87
LMO3Q8TAP4 AC083906.6-201ENST00000641366 219 ntBASIC20.46■□□□□ 0.87
LMO3Q8TAP4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LMO3Q8TAP4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 FSCN1P1-201ENST00000568912 1481 ntBASIC20.45■□□□□ 0.86
LMO3Q8TAP4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 NUDT16P1-203ENST00000513809 620 ntBASIC20.45■□□□□ 0.86
LMO3Q8TAP4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LMO3Q8TAP4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LMO3Q8TAP4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 FAM207BP-201ENST00000447172 505 ntBASIC20.43■□□□□ 0.86
LMO3Q8TAP4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LMO3Q8TAP4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms