Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SMG8Q8ND04 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SMG8Q8ND04 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.58■□□□□ 0.88
SMG8Q8ND04 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMG8Q8ND04 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 HOMER2P1-201ENST00000455653 964 ntBASIC20.57■□□□□ 0.88
SMG8Q8ND04 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 NEK4P2-201ENST00000580004 1012 ntBASIC20.57■□□□□ 0.88
SMG8Q8ND04 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMG8Q8ND04 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMG8Q8ND04 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 AL359075.1-203ENST00000462729 1002 ntBASIC20.56■□□□□ 0.88
SMG8Q8ND04 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMG8Q8ND04 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.56■□□□□ 0.88
SMG8Q8ND04 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 AL023284.2-201ENST00000405850 579 ntBASIC20.55■□□□□ 0.88
SMG8Q8ND04 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 GCSHP2-201ENST00000560971 527 ntBASIC20.55■□□□□ 0.88
SMG8Q8ND04 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.55■□□□□ 0.88
SMG8Q8ND04 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SMG8Q8ND04 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMG8Q8ND04 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 KRT8P3-201ENST00000519669 1449 ntBASIC20.54■□□□□ 0.88
SMG8Q8ND04 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 AL358472.4-201ENST00000633140 710 ntBASIC20.54■□□□□ 0.88
SMG8Q8ND04 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
SMG8Q8ND04 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMG8Q8ND04 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 AC073130.3-201ENST00000624389 2278 ntBASIC20.53■□□□□ 0.88
SMG8Q8ND04 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMG8Q8ND04 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms