Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VRK2Q86Y07 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VRK2Q86Y07 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VRK2Q86Y07 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK2Q86Y07 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK2Q86Y07 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VRK2Q86Y07 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VRK2Q86Y07 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 AC124016.1-201ENST00000609552 612 ntBASIC17.63■□□□□ 0.41
VRK2Q86Y07 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.63■□□□□ 0.41
VRK2Q86Y07 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.63■□□□□ 0.41
VRK2Q86Y07 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VRK2Q86Y07 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 KRT16P5-201ENST00000455284 522 ntBASIC17.62■□□□□ 0.41
VRK2Q86Y07 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 AC006058.3-201ENST00000606217 1069 ntBASIC17.62■□□□□ 0.41
VRK2Q86Y07 AC073648.6-201ENST00000641589 218 ntBASIC17.62■□□□□ 0.41
VRK2Q86Y07 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
VRK2Q86Y07 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VRK2Q86Y07 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 NEFHP1-201ENST00000412845 2629 ntBASIC17.61■□□□□ 0.41
VRK2Q86Y07 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 TSPY21P-201ENST00000433481 731 ntBASIC17.61■□□□□ 0.41
VRK2Q86Y07 TSPY23P-201ENST00000440136 739 ntBASIC17.61■□□□□ 0.41
VRK2Q86Y07 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 RN7SL471P-201ENST00000580476 299 ntBASIC17.61■□□□□ 0.41
VRK2Q86Y07 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.61■□□□□ 0.41
VRK2Q86Y07 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VRK2Q86Y07 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms