Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DCLRE1AQ6PJP8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DCLRE1AQ6PJP8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 AC125437.2-201ENST00000625180 2167 ntBASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.37■□□□□ 0.85
DCLRE1AQ6PJP8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 AP000523.1-201ENST00000398242 1049 ntBASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 AC092647.4-201ENST00000457211 535 ntBASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 MIR4674-201ENST00000582457 87 ntBASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 AC008622.2-201ENST00000617006 1229 ntBASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 AL023973.1-201ENST00000624619 620 ntBASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DCLRE1AQ6PJP8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms