Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP4Q6PIL6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 AC096631.2-201ENST00000436136 790 ntBASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KCNIP4Q6PIL6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 FP475955.4-201ENST00000623131 1990 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 TNRC18P3-201ENST00000441896 2691 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 AC024257.2-201ENST00000549699 147 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 AC027682.1-201ENST00000562846 899 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 AL512353.2-201ENST00000448759 1962 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 GNAS-203ENST00000306120 1878 ntBASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
KCNIP4Q6PIL6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
KCNIP4Q6PIL6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms