Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTR9Q6PD62 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTR9Q6PD62 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.66■■□□□ 1.22
CTR9Q6PD62 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CTR9Q6PD62 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CTR9Q6PD62 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.65■■□□□ 1.22
CTR9Q6PD62 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.64■■□□□ 1.22
CTR9Q6PD62 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTR9Q6PD62 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 HMGA1P5-201ENST00000412453 271 ntBASIC22.64■■□□□ 1.21
CTR9Q6PD62 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 AP003041.3-201ENST00000527151 707 ntBASIC22.64■■□□□ 1.21
CTR9Q6PD62 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CTR9Q6PD62 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.64■■□□□ 1.21
CTR9Q6PD62 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.64■■□□□ 1.21
CTR9Q6PD62 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CTR9Q6PD62 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 AC093484.2-201ENST00000580996 2166 ntBASIC22.63■■□□□ 1.21
CTR9Q6PD62 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CTR9Q6PD62 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CTR9Q6PD62 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CTR9Q6PD62 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.62■■□□□ 1.21
CTR9Q6PD62 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTR9Q6PD62 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTR9Q6PD62 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTR9Q6PD62 MIR1224-201ENST00000408193 85 ntBASIC22.61■■□□□ 1.21
CTR9Q6PD62 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CTR9Q6PD62 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.61■■□□□ 1.21
CTR9Q6PD62 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CTR9Q6PD62 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTR9Q6PD62 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.6■■□□□ 1.21
CTR9Q6PD62 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTR9Q6PD62 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTR9Q6PD62 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTR9Q6PD62 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CTR9Q6PD62 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms