Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 AC090340.1-201ENST00000620778 4980 ntBASIC18.34■□□□□ 0.53
RNF220Q5VTB9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 AC009237.14-201ENST00000609975 1594 ntBASIC18.34■□□□□ 0.53
RNF220Q5VTB9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF220Q5VTB9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.33■□□□□ 0.53
RNF220Q5VTB9 AC026185.1-201ENST00000445748 174 ntBASIC18.33■□□□□ 0.52
RNF220Q5VTB9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 RAP2CP1-201ENST00000605103 478 ntBASIC18.33■□□□□ 0.52
RNF220Q5VTB9 AL050303.2-201ENST00000619798 666 ntBASIC18.33■□□□□ 0.52
RNF220Q5VTB9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 AC141586.5-201ENST00000624546 2050 ntBASIC18.33■□□□□ 0.52
RNF220Q5VTB9 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.33■□□□□ 0.52
RNF220Q5VTB9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF220Q5VTB9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 MIR935-201ENST00000401179 91 ntBASIC18.32■□□□□ 0.52
RNF220Q5VTB9 LSM12P1-201ENST00000411836 588 ntBASIC18.32■□□□□ 0.52
RNF220Q5VTB9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 AF201337.1-201ENST00000520239 748 ntBASIC18.32■□□□□ 0.52
RNF220Q5VTB9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF220Q5VTB9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 AC006333.2-201ENST00000607957 2099 ntBASIC18.31■□□□□ 0.52
RNF220Q5VTB9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 MIR663A-201ENST00000385250 93 ntBASIC18.31■□□□□ 0.52
RNF220Q5VTB9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 MKRN4P-201ENST00000444706 1521 ntBASIC18.31■□□□□ 0.52
RNF220Q5VTB9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF220Q5VTB9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms