Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ERCC6LQ2NKX8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 RASA4CP-201ENST00000424092 1398 ntBASIC20.2■□□□□ 0.82
ERCC6LQ2NKX8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 SIRPAP1-201ENST00000448467 1770 ntBASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 MIR939-201ENST00000401314 82 ntBASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 AL162741.1-201ENST00000565563 1558 ntBASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 SDHAP1-207ENST00000440850 2000 ntBASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.19■□□□□ 0.82
ERCC6LQ2NKX8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 GNAS-203ENST00000306120 1878 ntBASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ERCC6LQ2NKX8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 IRS3P-201ENST00000223076 1006 ntBASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 KRT18P20-201ENST00000548986 1279 ntBASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms