Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.69■□□□□ 0.74
EIF3EP60228 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.69■□□□□ 0.74
EIF3EP60228 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.69■□□□□ 0.74
EIF3EP60228 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3EP60228 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.69■□□□□ 0.74
EIF3EP60228 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3EP60228 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
EIF3EP60228 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.69■□□□□ 0.74
EIF3EP60228 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
EIF3EP60228 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
EIF3EP60228 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.68■□□□□ 0.74
EIF3EP60228 TSPY21P-201ENST00000433481 731 ntBASIC19.68■□□□□ 0.74
EIF3EP60228 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.68■□□□□ 0.74
EIF3EP60228 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.68■□□□□ 0.74
EIF3EP60228 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.68■□□□□ 0.74
EIF3EP60228 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EIF3EP60228 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3EP60228 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.67■□□□□ 0.74
EIF3EP60228 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
EIF3EP60228 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.67■□□□□ 0.74
EIF3EP60228 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
EIF3EP60228 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
EIF3EP60228 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.67■□□□□ 0.74
EIF3EP60228 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.67■□□□□ 0.74
EIF3EP60228 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
EIF3EP60228 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 AL031598.1-201ENST00000561511 1773 ntBASIC19.67■□□□□ 0.74
EIF3EP60228 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.67■□□□□ 0.74
EIF3EP60228 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3EP60228 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.67■□□□□ 0.74
EIF3EP60228 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3EP60228 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 AC093525.10-201ENST00000625130 1569 ntBASIC19.66■□□□□ 0.74
EIF3EP60228 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3EP60228 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.66■□□□□ 0.74
EIF3EP60228 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.66■□□□□ 0.74
EIF3EP60228 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3EP60228 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.66■□□□□ 0.74
EIF3EP60228 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3EP60228 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.66■□□□□ 0.74
EIF3EP60228 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
EIF3EP60228 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3EP60228 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3EP60228 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EIF3EP60228 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.65■□□□□ 0.74
EIF3EP60228 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms