Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH4P55283 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.52■□□□□ 0.71
CDH4P55283 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CDH4P55283 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CDH4P55283 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH4P55283 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.51■□□□□ 0.71
CDH4P55283 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDH4P55283 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDH4P55283 INGX-201ENST00000359239 846 ntBASIC19.51■□□□□ 0.71
CDH4P55283 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 AC007663.1-201ENST00000438948 1240 ntBASIC19.51■□□□□ 0.71
CDH4P55283 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH4P55283 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.51■□□□□ 0.71
CDH4P55283 AC010653.2-201ENST00000623505 997 ntBASIC19.51■□□□□ 0.71
CDH4P55283 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH4P55283 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 IRX1P1-201ENST00000438849 1838 ntBASIC19.51■□□□□ 0.71
CDH4P55283 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.51■□□□□ 0.71
CDH4P55283 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH4P55283 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH4P55283 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH4P55283 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH4P55283 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.5■□□□□ 0.71
CDH4P55283 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CDH4P55283 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH4P55283 ECEL1P2-202ENST00000465689 757 ntBASIC19.5■□□□□ 0.71
CDH4P55283 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH4P55283 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 AC116562.4-201ENST00000641316 2276 ntBASIC19.5■□□□□ 0.71
CDH4P55283 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDH4P55283 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH4P55283 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDH4P55283 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.5■□□□□ 0.71
CDH4P55283 FP475955.4-201ENST00000623131 1990 ntBASIC19.5■□□□□ 0.71
CDH4P55283 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH4P55283 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH4P55283 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH4P55283 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDH4P55283 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.49■□□□□ 0.71
CDH4P55283 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.49■□□□□ 0.71
CDH4P55283 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CDH4P55283 AC005363.2-201ENST00000618631 242 ntBASIC19.49■□□□□ 0.71
CDH4P55283 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH4P55283 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH4P55283 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH4P55283 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDH4P55283 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH4P55283 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDH4P55283 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH4P55283 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH4P55283 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDH4P55283 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH4P55283 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH4P55283 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH4P55283 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH4P55283 FAM87A-204ENST00000613235 858 ntBASIC19.48■□□□□ 0.71
CDH4P55283 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH4P55283 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH4P55283 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH4P55283 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms