Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LIMK2P53671 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.24■□□□□ 0.67
LIMK2P53671 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.24■□□□□ 0.67
LIMK2P53671 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LIMK2P53671 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 KRT16P5-201ENST00000455284 522 ntBASIC19.23■□□□□ 0.67
LIMK2P53671 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.23■□□□□ 0.67
LIMK2P53671 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LIMK2P53671 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIMK2P53671 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.23■□□□□ 0.67
LIMK2P53671 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
LIMK2P53671 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.22■□□□□ 0.67
LIMK2P53671 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.22■□□□□ 0.67
LIMK2P53671 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LIMK2P53671 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
LIMK2P53671 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.22■□□□□ 0.67
LIMK2P53671 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.22■□□□□ 0.67
LIMK2P53671 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.22■□□□□ 0.67
LIMK2P53671 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
LIMK2P53671 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LIMK2P53671 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.22■□□□□ 0.67
LIMK2P53671 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIMK2P53671 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 FP475955.4-201ENST00000623131 1990 ntBASIC19.21■□□□□ 0.67
LIMK2P53671 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.21■□□□□ 0.67
LIMK2P53671 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.21■□□□□ 0.67
LIMK2P53671 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.21■□□□□ 0.67
LIMK2P53671 LINC01023-201ENST00000606054 436 ntBASIC19.21■□□□□ 0.67
LIMK2P53671 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LIMK2P53671 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK2P53671 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.21■□□□□ 0.67
LIMK2P53671 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.21■□□□□ 0.67
LIMK2P53671 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.21■□□□□ 0.67
LIMK2P53671 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LIMK2P53671 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK2P53671 IRX1P1-201ENST00000438849 1838 ntBASIC19.21■□□□□ 0.67
LIMK2P53671 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK2P53671 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms