Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC3P51654 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC3P51654 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.07■□□□□ 0.96
GPC3P51654 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
GPC3P51654 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GPC3P51654 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.07■□□□□ 0.96
GPC3P51654 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC3P51654 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC3P51654 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.06■□□□□ 0.96
GPC3P51654 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
GPC3P51654 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
GPC3P51654 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC3P51654 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC3P51654 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GPC3P51654 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
GPC3P51654 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
GPC3P51654 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC3P51654 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
GPC3P51654 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.06■□□□□ 0.96
GPC3P51654 AC116562.4-201ENST00000641316 2276 ntBASIC21.06■□□□□ 0.96
GPC3P51654 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
GPC3P51654 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.05■□□□□ 0.96
GPC3P51654 ARMC10P1-201ENST00000313754 855 ntBASIC21.05■□□□□ 0.96
GPC3P51654 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.05■□□□□ 0.96
GPC3P51654 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.05■□□□□ 0.96
GPC3P51654 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.05■□□□□ 0.96
GPC3P51654 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.05■□□□□ 0.96
GPC3P51654 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.05■□□□□ 0.96
GPC3P51654 AP003041.3-201ENST00000527151 707 ntBASIC21.05■□□□□ 0.96
GPC3P51654 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
GPC3P51654 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GPC3P51654 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 AC117947.1-201ENST00000427448 529 ntBASIC21.04■□□□□ 0.96
GPC3P51654 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.04■□□□□ 0.96
GPC3P51654 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.04■□□□□ 0.96
GPC3P51654 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 Z82202.1-201ENST00000623446 1880 ntBASIC21.04■□□□□ 0.96
GPC3P51654 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GPC3P51654 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
GPC3P51654 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
GPC3P51654 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GPC3P51654 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GPC3P51654 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GPC3P51654 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
GPC3P51654 AK4P3-201ENST00000418260 669 ntBASIC21.03■□□□□ 0.96
GPC3P51654 TSPY23P-201ENST00000440136 739 ntBASIC21.03■□□□□ 0.96
GPC3P51654 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms