Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC113347.1-201ENST00000413321 391 ntBASIC20.09■□□□□ 0.81
TUBP50607 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.09■□□□□ 0.81
TUBP50607 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.09■□□□□ 0.81
TUBP50607 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.09■□□□□ 0.81
TUBP50607 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBP50607 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
TUBP50607 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBP50607 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBP50607 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TUBP50607 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.08■□□□□ 0.81
TUBP50607 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TUBP50607 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBP50607 SLC25A1P2-201ENST00000430693 912 ntBASIC20.08■□□□□ 0.81
TUBP50607 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.08■□□□□ 0.81
TUBP50607 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.08■□□□□ 0.81
TUBP50607 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBP50607 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.08■□□□□ 0.81
TUBP50607 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBP50607 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBP50607 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TUBP50607 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TUBP50607 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.8
TUBP50607 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.08■□□□□ 0.8
TUBP50607 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.08■□□□□ 0.8
TUBP50607 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.08■□□□□ 0.8
TUBP50607 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.08■□□□□ 0.8
TUBP50607 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
TUBP50607 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 AC128688.1-201ENST00000487626 519 ntBASIC20.07■□□□□ 0.8
TUBP50607 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 KRT18P21-201ENST00000515767 1272 ntBASIC20.07■□□□□ 0.8
TUBP50607 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
TUBP50607 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
TUBP50607 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TUBP50607 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBP50607 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TUBP50607 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBP50607 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBP50607 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TUBP50607 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBP50607 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 AC104417.2-201ENST00000562989 1793 ntBASIC20.06■□□□□ 0.8
TUBP50607 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 ZNF815P-204ENST00000434898 1737 ntBASIC20.06■□□□□ 0.8
TUBP50607 SLC25A3P1-201ENST00000443844 931 ntBASIC20.06■□□□□ 0.8
TUBP50607 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 PRSS44-201ENST00000515154 1146 ntBASIC20.06■□□□□ 0.8
TUBP50607 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBP50607 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.06■□□□□ 0.8
TUBP50607 AC092865.7-201ENST00000641832 219 ntBASIC20.06■□□□□ 0.8
TUBP50607 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBP50607 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBP50607 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms