Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCLP35914 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGCLP35914 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGCLP35914 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 AL049812.1-201ENST00000432563 2267 ntBASIC19.01■□□□□ 0.63
HMGCLP35914 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 MFAP1P1-201ENST00000442257 1255 ntBASIC19.01■□□□□ 0.63
HMGCLP35914 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCLP35914 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGCLP35914 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
HMGCLP35914 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGCLP35914 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19■□□□□ 0.63
HMGCLP35914 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMGCLP35914 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19■□□□□ 0.63
HMGCLP35914 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19■□□□□ 0.63
HMGCLP35914 FITM1-202ENST00000559294 800 ntBASIC19■□□□□ 0.63
HMGCLP35914 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19■□□□□ 0.63
HMGCLP35914 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HMGCLP35914 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19■□□□□ 0.63
HMGCLP35914 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HMGCLP35914 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCLP35914 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19■□□□□ 0.63
HMGCLP35914 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCLP35914 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
HMGCLP35914 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCLP35914 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 CRYGFP-201ENST00000418459 633 ntBASIC18.99■□□□□ 0.63
HMGCLP35914 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HMGCLP35914 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCLP35914 AP000525.1-201ENST00000608286 694 ntBASIC18.99■□□□□ 0.63
HMGCLP35914 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
HMGCLP35914 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCLP35914 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCLP35914 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCLP35914 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCLP35914 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLP35914 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLP35914 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLP35914 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLP35914 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLP35914 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLP35914 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCLP35914 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HMGCLP35914 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLP35914 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCLP35914 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCLP35914 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCLP35914 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
HMGCLP35914 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms