Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT20P35900 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT20P35900 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT20P35900 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT20P35900 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT20P35900 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT20P35900 C1QBPP2-201ENST00000528754 825 ntBASIC18.12■□□□□ 0.49
KRT20P35900 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT20P35900 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT20P35900 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
KRT20P35900 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
KRT20P35900 NBPF21P-201ENST00000425093 1451 ntBASIC18.12■□□□□ 0.49
KRT20P35900 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT20P35900 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT20P35900 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
KRT20P35900 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT20P35900 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT20P35900 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 KRASP1-201ENST00000407852 552 ntBASIC18.11■□□□□ 0.49
KRT20P35900 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 RN7SL471P-201ENST00000580476 299 ntBASIC18.11■□□□□ 0.49
KRT20P35900 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.11■□□□□ 0.49
KRT20P35900 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 FAM197Y4-202ENST00000622692 608 ntBASIC18.11■□□□□ 0.49
KRT20P35900 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KRT20P35900 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT20P35900 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT20P35900 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT20P35900 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT20P35900 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT20P35900 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
KRT20P35900 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
KRT20P35900 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT20P35900 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT20P35900 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KRT20P35900 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
KRT20P35900 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT20P35900 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT20P35900 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms