Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCK1P35558 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.08■□□□□ 0.81
PCK1P35558 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.08■□□□□ 0.81
PCK1P35558 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.08■□□□□ 0.81
PCK1P35558 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCK1P35558 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.08■□□□□ 0.81
PCK1P35558 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCK1P35558 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.08■□□□□ 0.8
PCK1P35558 AL161938.1-201ENST00000569833 2180 ntBASIC20.08■□□□□ 0.8
PCK1P35558 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCK1P35558 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCK1P35558 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.07■□□□□ 0.8
PCK1P35558 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCK1P35558 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCK1P35558 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.07■□□□□ 0.8
PCK1P35558 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.07■□□□□ 0.8
PCK1P35558 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.07■□□□□ 0.8
PCK1P35558 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.07■□□□□ 0.8
PCK1P35558 AL160286.2-201ENST00000567150 934 ntBASIC20.07■□□□□ 0.8
PCK1P35558 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.07■□□□□ 0.8
PCK1P35558 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.07■□□□□ 0.8
PCK1P35558 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCK1P35558 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
PCK1P35558 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.07■□□□□ 0.8
PCK1P35558 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCK1P35558 AC020763.4-201ENST00000623414 4170 ntBASIC20.06■□□□□ 0.8
PCK1P35558 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCK1P35558 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCK1P35558 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.06■□□□□ 0.8
PCK1P35558 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.06■□□□□ 0.8
PCK1P35558 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PCK1P35558 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCK1P35558 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCK1P35558 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCK1P35558 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
PCK1P35558 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.05■□□□□ 0.8
PCK1P35558 AC004408.2-201ENST00000623613 2777 ntBASIC20.05■□□□□ 0.8
PCK1P35558 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCK1P35558 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.05■□□□□ 0.8
PCK1P35558 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.05■□□□□ 0.8
PCK1P35558 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.05■□□□□ 0.8
PCK1P35558 TNXA-203ENST00000507684 2038 ntBASIC20.05■□□□□ 0.8
PCK1P35558 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCK1P35558 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCK1P35558 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.04■□□□□ 0.8
PCK1P35558 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCK1P35558 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCK1P35558 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.04■□□□□ 0.8
PCK1P35558 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms