Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA11P31270 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA11P31270 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA11P31270 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA11P31270 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA11P31270 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA11P31270 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXA11P31270 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA11P31270 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA11P31270 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA11P31270 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA11P31270 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HOXA11P31270 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA11P31270 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA11P31270 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA11P31270 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA11P31270 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.64■□□□□ 0.9
HOXA11P31270 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXA11P31270 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXA11P31270 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXA11P31270 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA11P31270 HOMER2P1-201ENST00000455653 964 ntBASIC20.64■□□□□ 0.89
HOXA11P31270 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA11P31270 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA11P31270 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXA11P31270 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
HOXA11P31270 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA11P31270 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXA11P31270 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA11P31270 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXA11P31270 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA11P31270 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
HOXA11P31270 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA11P31270 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 KRT18P38-201ENST00000449496 1282 ntBASIC20.63■□□□□ 0.89
HOXA11P31270 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 GCSHP2-201ENST00000560971 527 ntBASIC20.63■□□□□ 0.89
HOXA11P31270 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
HOXA11P31270 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA11P31270 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HOXA11P31270 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
HOXA11P31270 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HOXA11P31270 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 AC092647.4-201ENST00000457211 535 ntBASIC20.62■□□□□ 0.89
HOXA11P31270 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXA11P31270 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
HOXA11P31270 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXA11P31270 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
HOXA11P31270 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXA11P31270 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.62■□□□□ 0.89
HOXA11P31270 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HOXA11P31270 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXA11P31270 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA11P31270 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms