Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 RPS2P4-201ENST00000476944 856 ntBASIC19.42■□□□□ 0.7
PSMB4P28070 AP002982.1-201ENST00000492365 877 ntBASIC19.42■□□□□ 0.7
PSMB4P28070 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.42■□□□□ 0.7
PSMB4P28070 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PSMB4P28070 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMB4P28070 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PSMB4P28070 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PSMB4P28070 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PSMB4P28070 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMB4P28070 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMB4P28070 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PSMB4P28070 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 KRT18P29-201ENST00000397031 1267 ntBASIC19.41■□□□□ 0.7
PSMB4P28070 AC004980.1-204ENST00000429707 299 ntBASIC19.41■□□□□ 0.7
PSMB4P28070 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.41■□□□□ 0.7
PSMB4P28070 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.41■□□□□ 0.7
PSMB4P28070 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.41■□□□□ 0.7
PSMB4P28070 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.41■□□□□ 0.7
PSMB4P28070 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.41■□□□□ 0.7
PSMB4P28070 AL359736.2-201ENST00000621992 437 ntBASIC19.41■□□□□ 0.7
PSMB4P28070 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.41■□□□□ 0.7
PSMB4P28070 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.41■□□□□ 0.7
PSMB4P28070 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PSMB4P28070 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.4■□□□□ 0.7
PSMB4P28070 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PSMB4P28070 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.4■□□□□ 0.7
PSMB4P28070 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 AL353708.3-201ENST00000610272 989 ntBASIC19.4■□□□□ 0.7
PSMB4P28070 FAM197Y4-202ENST00000622692 608 ntBASIC19.4■□□□□ 0.7
PSMB4P28070 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PSMB4P28070 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PSMB4P28070 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMB4P28070 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMB4P28070 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PSMB4P28070 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PSMB4P28070 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PSMB4P28070 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.39■□□□□ 0.7
PSMB4P28070 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PSMB4P28070 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PSMB4P28070 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PSMB4P28070 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PSMB4P28070 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSMB4P28070 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
PSMB4P28070 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMB4P28070 PRORSD1P-201ENST00000295112 541 ntBASIC19.39■□□□□ 0.69
PSMB4P28070 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMB4P28070 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.39■□□□□ 0.69
PSMB4P28070 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.39■□□□□ 0.69
PSMB4P28070 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.39■□□□□ 0.69
PSMB4P28070 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PSMB4P28070 AC131212.4-201ENST00000623606 975 ntBASIC19.39■□□□□ 0.69
PSMB4P28070 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMB4P28070 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms