Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.77■□□□□ 0.91
RFX1P22670 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFX1P22670 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RFX1P22670 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RFX1P22670 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.76■□□□□ 0.91
RFX1P22670 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
RFX1P22670 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.76■□□□□ 0.91
RFX1P22670 AC005521.1-201ENST00000393351 872 ntBASIC20.76■□□□□ 0.91
RFX1P22670 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX1P22670 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX1P22670 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFX1P22670 AC145285.6-201ENST00000604632 637 ntBASIC20.76■□□□□ 0.91
RFX1P22670 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX1P22670 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.76■□□□□ 0.91
RFX1P22670 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFX1P22670 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.75■□□□□ 0.91
RFX1P22670 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 UNC93B2-201ENST00000285383 730 ntBASIC20.75■□□□□ 0.91
RFX1P22670 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 KRT18P57-201ENST00000443599 1254 ntBASIC20.75■□□□□ 0.91
RFX1P22670 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 KRT16P5-201ENST00000455284 522 ntBASIC20.75■□□□□ 0.91
RFX1P22670 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 AC138932.1-201ENST00000534164 6830 ntBASIC20.75■□□□□ 0.91
RFX1P22670 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
RFX1P22670 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RFX1P22670 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFX1P22670 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RFX1P22670 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.74■□□□□ 0.91
RFX1P22670 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFX1P22670 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.74■□□□□ 0.91
RFX1P22670 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFX1P22670 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RFX1P22670 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.74■□□□□ 0.91
RFX1P22670 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFX1P22670 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 AL137013.1-201ENST00000432946 1228 ntBASIC20.73■□□□□ 0.91
RFX1P22670 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.73■□□□□ 0.91
RFX1P22670 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 AC073195.1-201ENST00000607241 877 ntBASIC20.73■□□□□ 0.91
RFX1P22670 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.73■□□□□ 0.91
RFX1P22670 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.73■□□□□ 0.91
RFX1P22670 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms