Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.61■□□□□ 0.73
BRAFP15056 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.61■□□□□ 0.73
BRAFP15056 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.61■□□□□ 0.73
BRAFP15056 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BRAFP15056 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BRAFP15056 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
BRAFP15056 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.6■□□□□ 0.73
BRAFP15056 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.6■□□□□ 0.73
BRAFP15056 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRAFP15056 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.6■□□□□ 0.73
BRAFP15056 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.6■□□□□ 0.73
BRAFP15056 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.6■□□□□ 0.73
BRAFP15056 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BRAFP15056 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
BRAFP15056 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.6■□□□□ 0.73
BRAFP15056 AC141586.3-201ENST00000562166 1838 ntBASIC19.6■□□□□ 0.73
BRAFP15056 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BRAFP15056 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BRAFP15056 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.6■□□□□ 0.73
BRAFP15056 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.59■□□□□ 0.73
BRAFP15056 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 TEX21P-204ENST00000641479 1693 ntBASIC19.59■□□□□ 0.73
BRAFP15056 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BRAFP15056 KRT17P3-201ENST00000420566 1262 ntBASIC19.59■□□□□ 0.73
BRAFP15056 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.59■□□□□ 0.73
BRAFP15056 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 AC069544.1-201ENST00000609399 999 ntBASIC19.59■□□□□ 0.73
BRAFP15056 AC090164.3-201ENST00000610780 2143 ntBASIC19.59■□□□□ 0.73
BRAFP15056 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.59■□□□□ 0.73
BRAFP15056 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
BRAFP15056 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BRAFP15056 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BRAFP15056 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BRAFP15056 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.58■□□□□ 0.73
BRAFP15056 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
BRAFP15056 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRAFP15056 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRAFP15056 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.58■□□□□ 0.73
BRAFP15056 WIZP1-201ENST00000531444 2299 ntBASIC19.58■□□□□ 0.73
BRAFP15056 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRAFP15056 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.58■□□□□ 0.73
BRAFP15056 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BRAFP15056 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.58■□□□□ 0.73
BRAFP15056 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
BRAFP15056 HLA-G-202ENST00000376815 851 ntBASIC19.58■□□□□ 0.72
BRAFP15056 HLA-G-203ENST00000376818 1127 ntBASIC19.58■□□□□ 0.72
BRAFP15056 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
BRAFP15056 GCSHP5-201ENST00000443090 522 ntBASIC19.58■□□□□ 0.72
BRAFP15056 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.58■□□□□ 0.72
BRAFP15056 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.58■□□□□ 0.72
BRAFP15056 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRAFP15056 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BRAFP15056 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.58■□□□□ 0.72
BRAFP15056 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
BRAFP15056 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
BRAFP15056 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.58■□□□□ 0.72
BRAFP15056 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRAFP15056 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
BRAFP15056 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.57■□□□□ 0.72
BRAFP15056 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BRAFP15056 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.57■□□□□ 0.72
BRAFP15056 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.57■□□□□ 0.72
BRAFP15056 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms