Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 AC092118.2-201ENST00000613495 667 ntBASIC18.42■□□□□ 0.54
LINGO3P0C6S8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LINGO3P0C6S8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LINGO3P0C6S8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 AL138781.1-201ENST00000566567 1274 ntBASIC18.4■□□□□ 0.54
LINGO3P0C6S8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINGO3P0C6S8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LINGO3P0C6S8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LINGO3P0C6S8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINGO3P0C6S8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINGO3P0C6S8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
LINGO3P0C6S8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 AC142086.2-201ENST00000569753 217 ntBASIC18.39■□□□□ 0.53
LINGO3P0C6S8 MIR4758-201ENST00000577688 71 ntBASIC18.39■□□□□ 0.53
LINGO3P0C6S8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.39■□□□□ 0.53
LINGO3P0C6S8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms