Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.32■■□□□ 1.48
SNRPA1P09661 VENTXP5-201ENST00000523979 775 ntBASIC24.32■■□□□ 1.48
SNRPA1P09661 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.32■■□□□ 1.48
SNRPA1P09661 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.32■■□□□ 1.48
SNRPA1P09661 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.32■■□□□ 1.48
SNRPA1P09661 Z82202.1-201ENST00000623446 1880 ntBASIC24.32■■□□□ 1.48
SNRPA1P09661 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SNRPA1P09661 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SNRPA1P09661 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.31■■□□□ 1.48
SNRPA1P09661 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.31■■□□□ 1.48
SNRPA1P09661 LINC01311-201ENST00000565162 1445 ntBASIC24.31■■□□□ 1.48
SNRPA1P09661 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC24.31■■□□□ 1.48
SNRPA1P09661 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNRPA1P09661 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.31■■□□□ 1.48
SNRPA1P09661 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 AC036111.1-201ENST00000533973 1582 ntBASIC24.3■■□□□ 1.48
SNRPA1P09661 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.3■■□□□ 1.48
SNRPA1P09661 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.3■■□□□ 1.48
SNRPA1P09661 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNRPA1P09661 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
SNRPA1P09661 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SNRPA1P09661 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SNRPA1P09661 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SNRPA1P09661 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.29■■□□□ 1.48
SNRPA1P09661 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
SNRPA1P09661 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 MCCD1P1-208ENST00000445732 328 ntBASIC24.29■■□□□ 1.48
SNRPA1P09661 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC24.29■■□□□ 1.48
SNRPA1P09661 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.29■■□□□ 1.48
SNRPA1P09661 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
SNRPA1P09661 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNRPA1P09661 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.29■■□□□ 1.48
SNRPA1P09661 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.29■■□□□ 1.48
SNRPA1P09661 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.29■■□□□ 1.48
SNRPA1P09661 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.28■■□□□ 1.48
SNRPA1P09661 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.28■■□□□ 1.48
SNRPA1P09661 TEX21P-204ENST00000641479 1693 ntBASIC24.28■■□□□ 1.48
SNRPA1P09661 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.28■■□□□ 1.48
SNRPA1P09661 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNRPA1P09661 MIR3180-5-201ENST00000583743 153 ntBASIC24.28■■□□□ 1.48
SNRPA1P09661 FGF14-AS2-201ENST00000606448 1074 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms