Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
APOA4P06727 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.12■□□□□ 0.65
APOA4P06727 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.12■□□□□ 0.65
APOA4P06727 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.12■□□□□ 0.65
APOA4P06727 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 FAM197Y4-202ENST00000622692 608 ntBASIC19.12■□□□□ 0.65
APOA4P06727 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.12■□□□□ 0.65
APOA4P06727 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.12■□□□□ 0.65
APOA4P06727 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
APOA4P06727 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 AL049812.1-201ENST00000432563 2267 ntBASIC19.12■□□□□ 0.65
APOA4P06727 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.12■□□□□ 0.65
APOA4P06727 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOA4P06727 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
APOA4P06727 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 PRORSD1P-201ENST00000295112 541 ntBASIC19.11■□□□□ 0.65
APOA4P06727 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
APOA4P06727 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.11■□□□□ 0.65
APOA4P06727 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.11■□□□□ 0.65
APOA4P06727 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
APOA4P06727 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APOA4P06727 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOA4P06727 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
APOA4P06727 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
APOA4P06727 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.1■□□□□ 0.65
APOA4P06727 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
APOA4P06727 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.1■□□□□ 0.65
APOA4P06727 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
APOA4P06727 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
APOA4P06727 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.1■□□□□ 0.65
APOA4P06727 AL359736.2-201ENST00000621992 437 ntBASIC19.1■□□□□ 0.65
APOA4P06727 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOA4P06727 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 HCG11-201ENST00000411553 5696 ntBASIC19.09■□□□□ 0.65
APOA4P06727 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.09■□□□□ 0.65
APOA4P06727 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
APOA4P06727 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
APOA4P06727 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
APOA4P06727 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.09■□□□□ 0.65
APOA4P06727 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.09■□□□□ 0.65
APOA4P06727 C1QL1P1-201ENST00000568105 661 ntBASIC19.09■□□□□ 0.65
APOA4P06727 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.09■□□□□ 0.65
APOA4P06727 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.09■□□□□ 0.65
APOA4P06727 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOA4P06727 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
APOA4P06727 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
APOA4P06727 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
APOA4P06727 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
APOA4P06727 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
APOA4P06727 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
APOA4P06727 AC093525.10-201ENST00000625130 1569 ntBASIC19.08■□□□□ 0.65
APOA4P06727 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
APOA4P06727 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms