Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.16■■□□□ 1.62
COL5A2P05997 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.16■■□□□ 1.62
COL5A2P05997 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.16■■□□□ 1.62
COL5A2P05997 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL5A2P05997 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL5A2P05997 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
COL5A2P05997 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
COL5A2P05997 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
COL5A2P05997 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.16■■□□□ 1.62
COL5A2P05997 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
COL5A2P05997 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
COL5A2P05997 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
COL5A2P05997 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.15■■□□□ 1.62
COL5A2P05997 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.15■■□□□ 1.62
COL5A2P05997 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.15■■□□□ 1.62
COL5A2P05997 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.15■■□□□ 1.62
COL5A2P05997 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.15■■□□□ 1.62
COL5A2P05997 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
COL5A2P05997 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
COL5A2P05997 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.14■■□□□ 1.62
COL5A2P05997 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
COL5A2P05997 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
COL5A2P05997 AKR1C7P-201ENST00000305623 895 ntBASIC25.14■■□□□ 1.61
COL5A2P05997 KRT16P4-201ENST00000453883 522 ntBASIC25.14■■□□□ 1.61
COL5A2P05997 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.14■■□□□ 1.61
COL5A2P05997 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
COL5A2P05997 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
COL5A2P05997 AC138894.3-201ENST00000603787 634 ntBASIC25.14■■□□□ 1.61
COL5A2P05997 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.14■■□□□ 1.61
COL5A2P05997 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.14■■□□□ 1.61
COL5A2P05997 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
COL5A2P05997 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
COL5A2P05997 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
COL5A2P05997 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC25.13■■□□□ 1.61
COL5A2P05997 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.13■■□□□ 1.61
COL5A2P05997 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 KRT8P3-201ENST00000519669 1449 ntBASIC25.13■■□□□ 1.61
COL5A2P05997 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC25.13■■□□□ 1.61
COL5A2P05997 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.13■■□□□ 1.61
COL5A2P05997 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.13■■□□□ 1.61
COL5A2P05997 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
COL5A2P05997 Z83836.1-201ENST00000624605 1642 ntBASIC25.13■■□□□ 1.61
COL5A2P05997 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL5A2P05997 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.12■■□□□ 1.61
COL5A2P05997 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL5A2P05997 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL5A2P05997 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL5A2P05997 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC25.12■■□□□ 1.61
COL5A2P05997 AL121912.1-201ENST00000603683 238 ntBASIC25.12■■□□□ 1.61
COL5A2P05997 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL5A2P05997 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.11■■□□□ 1.61
COL5A2P05997 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.11■■□□□ 1.61
COL5A2P05997 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 AP000593.1-201ENST00000393668 712 ntBASIC25.11■■□□□ 1.61
COL5A2P05997 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.11■■□□□ 1.61
COL5A2P05997 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.11■■□□□ 1.61
COL5A2P05997 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
COL5A2P05997 AL662844.1-201ENST00000546340 181 ntBASIC25.11■■□□□ 1.61
COL5A2P05997 AL390719.2-201ENST00000606993 987 ntBASIC25.11■■□□□ 1.61
COL5A2P05997 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
COL5A2P05997 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
COL5A2P05997 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
COL5A2P05997 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL5A2P05997 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
COL5A2P05997 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC25.1■■□□□ 1.61
COL5A2P05997 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL5A2P05997 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC25.1■■□□□ 1.61
COL5A2P05997 AC104819.1-201ENST00000504587 486 ntBASIC25.1■■□□□ 1.61
COL5A2P05997 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.1■■□□□ 1.61
COL5A2P05997 AC074051.2-201ENST00000565115 352 ntBASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms