Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNORA78-201ENST00000459373 127 ntBASIC19.37■□□□□ 0.69
HLA-DQB2P05538 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DQB2P05538 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 AL355355.2-201ENST00000442321 338 ntBASIC19.36■□□□□ 0.69
HLA-DQB2P05538 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 PRSS44-201ENST00000515154 1146 ntBASIC19.36■□□□□ 0.69
HLA-DQB2P05538 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DQB2P05538 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AP003071.4-201ENST00000562276 1284 ntBASIC19.35■□□□□ 0.69
HLA-DQB2P05538 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AP000692.2-201ENST00000608391 879 ntBASIC19.35■□□□□ 0.69
HLA-DQB2P05538 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DQB2P05538 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 TNXA-203ENST00000507684 2038 ntBASIC19.34■□□□□ 0.69
HLA-DQB2P05538 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 AC066615.1-201ENST00000640911 628 ntBASIC19.34■□□□□ 0.69
HLA-DQB2P05538 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 AC006333.2-201ENST00000607957 2099 ntBASIC19.34■□□□□ 0.69
HLA-DQB2P05538 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.34■□□□□ 0.69
HLA-DQB2P05538 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HLA-DQB2P05538 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.69
HLA-DQB2P05538 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.33■□□□□ 0.69
HLA-DQB2P05538 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HLA-DQB2P05538 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.33■□□□□ 0.68
HLA-DQB2P05538 AC093827.2-201ENST00000512654 315 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms