Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.58■□□□□ 0.08
SSSCA1O60232 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SSSCA1O60232 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SSSCA1O60232 AC116351.2-201ENST00000606540 1585 ntBASIC15.58■□□□□ 0.08
SSSCA1O60232 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SSSCA1O60232 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SSSCA1O60232 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.57■□□□□ 0.08
SSSCA1O60232 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.57■□□□□ 0.08
SSSCA1O60232 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SSSCA1O60232 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.57■□□□□ 0.08
SSSCA1O60232 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SSSCA1O60232 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SSSCA1O60232 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SSSCA1O60232 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.56■□□□□ 0.08
SSSCA1O60232 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.56■□□□□ 0.08
SSSCA1O60232 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SSSCA1O60232 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SSSCA1O60232 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SSSCA1O60232 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SSSCA1O60232 SDHAP1-207ENST00000440850 2000 ntBASIC15.55■□□□□ 0.08
SSSCA1O60232 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.55■□□□□ 0.08
SSSCA1O60232 AC020916.1-201ENST00000587762 1774 ntBASIC15.55■□□□□ 0.08
SSSCA1O60232 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SSSCA1O60232 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SSSCA1O60232 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.55■□□□□ 0.08
SSSCA1O60232 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms