Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.29■□□□□ 0.68
SMAD6O43541 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 HMGA1P5-201ENST00000412453 271 ntBASIC19.29■□□□□ 0.68
SMAD6O43541 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.29■□□□□ 0.68
SMAD6O43541 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMAD6O43541 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD6O43541 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.29■□□□□ 0.68
SMAD6O43541 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD6O43541 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD6O43541 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD6O43541 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD6O43541 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD6O43541 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD6O43541 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMAD6O43541 AC008622.2-201ENST00000617006 1229 ntBASIC19.28■□□□□ 0.68
SMAD6O43541 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.28■□□□□ 0.68
SMAD6O43541 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMAD6O43541 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMAD6O43541 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMAD6O43541 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.28■□□□□ 0.68
SMAD6O43541 AC141586.3-201ENST00000562166 1838 ntBASIC19.28■□□□□ 0.68
SMAD6O43541 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD6O43541 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 AC116562.4-201ENST00000641316 2276 ntBASIC19.27■□□□□ 0.68
SMAD6O43541 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD6O43541 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD6O43541 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.27■□□□□ 0.68
SMAD6O43541 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD6O43541 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.27■□□□□ 0.68
SMAD6O43541 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
SMAD6O43541 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.27■□□□□ 0.68
SMAD6O43541 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 IRX1P1-201ENST00000438849 1838 ntBASIC19.27■□□□□ 0.68
SMAD6O43541 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMAD6O43541 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD6O43541 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.27■□□□□ 0.67
SMAD6O43541 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD6O43541 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMAD6O43541 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 LIN28AP1-201ENST00000429574 405 ntBASIC19.26■□□□□ 0.67
SMAD6O43541 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.26■□□□□ 0.67
SMAD6O43541 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD6O43541 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD6O43541 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD6O43541 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD6O43541 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SMAD6O43541 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMAD6O43541 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
SMAD6O43541 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD6O43541 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD6O43541 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms