Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.27■□□□□ 0.67
HTRA2O43464 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HTRA2O43464 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HTRA2O43464 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HTRA2O43464 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
HTRA2O43464 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HTRA2O43464 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HTRA2O43464 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 TNXA-203ENST00000507684 2038 ntBASIC19.26■□□□□ 0.67
HTRA2O43464 MMP23A-201ENST00000234610 1017 ntBASIC19.26■□□□□ 0.67
HTRA2O43464 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 MIR1238-201ENST00000408483 83 ntBASIC19.26■□□□□ 0.67
HTRA2O43464 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.26■□□□□ 0.67
HTRA2O43464 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.26■□□□□ 0.67
HTRA2O43464 SLC25A1P4-201ENST00000567977 778 ntBASIC19.26■□□□□ 0.67
HTRA2O43464 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.26■□□□□ 0.67
HTRA2O43464 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTRA2O43464 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HTRA2O43464 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 AC005332.7-201ENST00000614046 2005 ntBASIC19.25■□□□□ 0.67
HTRA2O43464 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 AL390955.1-201ENST00000428694 934 ntBASIC19.25■□□□□ 0.67
HTRA2O43464 MFAP1P1-201ENST00000442257 1255 ntBASIC19.25■□□□□ 0.67
HTRA2O43464 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 AC073912.3-201ENST00000624414 853 ntBASIC19.25■□□□□ 0.67
HTRA2O43464 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 AC141586.3-201ENST00000562166 1838 ntBASIC19.25■□□□□ 0.67
HTRA2O43464 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
HTRA2O43464 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.25■□□□□ 0.67
HTRA2O43464 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTRA2O43464 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.24■□□□□ 0.67
HTRA2O43464 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.24■□□□□ 0.67
HTRA2O43464 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.24■□□□□ 0.67
HTRA2O43464 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.24■□□□□ 0.67
HTRA2O43464 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 CRYGFP-201ENST00000418459 633 ntBASIC19.24■□□□□ 0.67
HTRA2O43464 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.24■□□□□ 0.67
HTRA2O43464 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.24■□□□□ 0.67
HTRA2O43464 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.24■□□□□ 0.67
HTRA2O43464 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
HTRA2O43464 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.24■□□□□ 0.67
HTRA2O43464 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.24■□□□□ 0.67
HTRA2O43464 KRT8P9-201ENST00000558927 1449 ntBASIC19.24■□□□□ 0.67
HTRA2O43464 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTRA2O43464 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTRA2O43464 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTRA2O43464 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HTRA2O43464 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.23■□□□□ 0.67
HTRA2O43464 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.23■□□□□ 0.67
HTRA2O43464 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.23■□□□□ 0.67
HTRA2O43464 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTRA2O43464 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HTRA2O43464 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.23■□□□□ 0.67
HTRA2O43464 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.23■□□□□ 0.67
HTRA2O43464 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTRA2O43464 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.23■□□□□ 0.67
HTRA2O43464 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms