Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NDUFA1O15239 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFA1O15239 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.07□□□□□ -0.32
NDUFA1O15239 DUX4L16-201ENST00000555130 1264 ntBASIC13.07□□□□□ -0.32
NDUFA1O15239 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.07□□□□□ -0.32
NDUFA1O15239 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFA1O15239 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFA1O15239 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFA1O15239 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFA1O15239 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.07□□□□□ -0.32
NDUFA1O15239 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFA1O15239 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.07□□□□□ -0.32
NDUFA1O15239 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.07□□□□□ -0.32
NDUFA1O15239 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NDUFA1O15239 FP475955.4-201ENST00000623131 1990 ntBASIC13.07□□□□□ -0.32
NDUFA1O15239 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
NDUFA1O15239 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.06□□□□□ -0.32
NDUFA1O15239 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NDUFA1O15239 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.06□□□□□ -0.32
NDUFA1O15239 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.06□□□□□ -0.32
NDUFA1O15239 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 AC007322.1-201ENST00000426983 750 ntBASIC13.06□□□□□ -0.32
NDUFA1O15239 CNN2P6-201ENST00000439038 900 ntBASIC13.06□□□□□ -0.32
NDUFA1O15239 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.06□□□□□ -0.32
NDUFA1O15239 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.06□□□□□ -0.32
NDUFA1O15239 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.06□□□□□ -0.32
NDUFA1O15239 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 AL512353.2-201ENST00000448759 1962 ntBASIC13.06□□□□□ -0.32
NDUFA1O15239 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.06□□□□□ -0.32
NDUFA1O15239 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.06□□□□□ -0.32
NDUFA1O15239 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
NDUFA1O15239 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.06□□□□□ -0.32
NDUFA1O15239 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NDUFA1O15239 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NDUFA1O15239 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.05□□□□□ -0.32
NDUFA1O15239 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.05□□□□□ -0.32
NDUFA1O15239 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.05□□□□□ -0.32
NDUFA1O15239 OR10C1-204ENST00000622521 1039 ntBASIC13.05□□□□□ -0.32
NDUFA1O15239 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NDUFA1O15239 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms