Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.65■□□□□ 0.42
TNFRSF11BO00300 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 AP006587.1-201ENST00000534129 1502 ntBASIC17.65■□□□□ 0.42
TNFRSF11BO00300 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 AL133373.2-201ENST00000623187 2828 ntBASIC17.65■□□□□ 0.42
TNFRSF11BO00300 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFRSF11BO00300 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFRSF11BO00300 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 YBX1P10-201ENST00000444752 975 ntBASIC17.64■□□□□ 0.41
TNFRSF11BO00300 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 AC133552.2-202ENST00000575694 574 ntBASIC17.64■□□□□ 0.41
TNFRSF11BO00300 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 ANO7L1-203ENST00000602586 1720 ntBASIC17.64■□□□□ 0.41
TNFRSF11BO00300 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFRSF11BO00300 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 MKRN4P-201ENST00000444706 1521 ntBASIC17.63■□□□□ 0.41
TNFRSF11BO00300 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 RPS2P52-201ENST00000469610 820 ntBASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 AC006557.6-201ENST00000623071 864 ntBASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 NOC2LP1-202ENST00000452600 2235 ntBASIC17.63■□□□□ 0.41
TNFRSF11BO00300 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFRSF11BO00300 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms