Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
SPDYE4A6NLX3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SPDYE4A6NLX3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 AL035696.2-201ENST00000407941 709 ntBASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 AC010331.1-201ENST00000611423 582 ntBASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.45■■□□□ 1.02
SPDYE4A6NLX3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 AC104581.1-202ENST00000635932 2618 ntBASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPDYE4A6NLX3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.43■■□□□ 1.02
SPDYE4A6NLX3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPDYE4A6NLX3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms