Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 AC016769.1-201ENST00000409132 1010 ntBASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 LSM12P1-201ENST00000411836 588 ntBASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV27A0A0K0K1C4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 AC005829.2-201ENST00000571422 1056 ntBASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 AC011767.1-201ENST00000617410 1153 ntBASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 AP006587.1-201ENST00000534129 1502 ntBASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV27A0A0K0K1C4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 BCL2-203ENST00000589955 5011 ntBASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 AC007322.1-201ENST00000426983 750 ntBASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 LTB4R2-202ENST00000528054 3092 ntBASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRBV27A0A0K0K1C4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms