Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 AC011767.1-201ENST00000617410 1153 ntBASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 AC006333.2-201ENST00000607957 2099 ntBASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 AC141586.3-201ENST00000562166 1838 ntBASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV13-1A0A0B4J241 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 AC010980.2-201ENST00000587099 1412 ntBASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV13-1A0A0B4J241 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 AC116351.2-201ENST00000606540 1585 ntBASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms